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View Structure Prediction Details

Protein: CE03130
Organism: Caenorhabditis elegans
Length: 269 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE03130.

Description E-value Query
Range
Subject
Range
gi|169767464 - gi|169767464|ref|XP_001818203.1| hypothetical protein [Aspergillus oryzae RIB40]
gi|83766058 - gi|83766058|dbj|BAE56201.1| unnamed protein product [Aspergillus oryzae]
353.0 [0..17] [269..335]

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Predicted Domain #1
Region A:
Residues: [1-269]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKITKNVVL IRTLEAKILL VRTFSFTRLL LLDVAFSIYL WNIWTPNWEW TVNEFWDQTG  60
   61 NVADNLNGTI TWLRSNPAGL KLNTPVNETL AWFFTYHIYL WTTFIGFLRS DAFFRFIAYS 120
  121 LIGGISTFSA MVYDFSQIFF LHFNCFDAYA TKLCYLCYYT LTVLWSLVRG KKWNPLRERK 180
  181 DTVILDTRQQ FLATSLFVIL LFILPTIFVY FVVFRCLRLA VSALQTVLYF FATWPFQLFA 240
  241 LEKHLAEKYG KPADAQNEAL AEKKTKSQN

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 109.39794
Match: PF05024.6
Description: No description for PF05024.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle