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View Structure Prediction Details

Protein: CE03107
Organism: Caenorhabditis elegans
Length: 666 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE03107.

Description E-value Query
Range
Subject
Range
EI2BE_RAT, E2BE_RAT - (Q64350) Translation initiation factor eIF-2B epsilon subunit (eIF-2B GDP-GTP exchange factor), (Q64...
305.0 [0..11] [665..30]

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Predicted Domain #1
Region A:
Residues: [1-517]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPPVSAFKK TPKKEEHPLV AIVILDAFDQ RFAPTHESYP CFGTIPICNV PAINFALSWL  60
   61 MRTEVKNVML VVSGLNADHA TSVQREWRLA FDEFTVVVCD GASSVGDCMR EIHNRELITG 120
  121 DFMLISNPTA VVSSTLSAQI SEFRKRRREN PDNVMTLLYS NRENPEHLVL GINSETSKLM 180
  181 LFPAANSLNQ LKASKKDFYD EVDIRRDLTP TGIAFCSRLI ATQFSDNFDF VGIDDVVREI 240
  241 LSKDDILGMS VHVEVLSPKE RAFCAYDYES LILLNILMLE RWFYPLVPEN SDPSRYFSAN 300
  301 PRNLYLEENG DEISIKANTW ILNNNCSTVC LGVKTDIAYD AFIRNSCIGA HTEISSKTRI 360
  361 TSSMIGKNCK IGENCVIEYA FIGDDVVIPN GAHIPKESII GNGVMYPKEL PNIQNTAIFK 420
  421 NAINEETFEK LSSQPIGNVH VSKFRNGGPF WRRSVNGKTN FALEEDDSES EYSESEEEDD 480
  481 GVGNSTKMFH DEVLESMQKI LESENSLMRN LILEINS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 65.39794
Match: 1hv9A
Description: N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain; N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transferase activity 0.408140110158132 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.226601331901441 bayes_pls_golite062009
catalytic activity 0.222379358704242 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [518-666]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SKLACNVTMD EVARNVFAAF MKLKHNQDFN KMKELIVKWQ PLFLNYYKTS AESLKVKSAD  60
   61 QKRFELDLKR RCQIQLLLAI EDKFDRDESF GVKAQALVHY LYQEADILDE DSIIEWAGSI 120
  121 AEESKLKGLM KKIVDWLQED DDEEESEDE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.09691
Match: 2iu1A
Description: No description for 2iu1A was found.

YRC Informatics Platform - Version 3.0
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