| Protein: | clec-182 |
| Organism: | Caenorhabditis elegans |
| Length: | 339 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for clec-182.
| Description | E-value | Query Range |
Subject Range |
|
|
214.0 | [0..6] | [338..868] |
|
Region A: Residues: [1-93] |
1 11 21 31 41 51
| | | | | |
1 MTFENFQNIY EKTIDLSSIK TCWMFDGTIH EAEKDYPDRG YTCTVKIPGW VADEKEAKDY 60
61 CNSKLPFYIT GHRPGGASTR CTFRACSLVT VAC
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [94-222] |
1 11 21 31 41 51
| | | | | |
1 EPDYWQILGK CYKVYDGKFT YKEAEDTCSK QSVGPELSPK VANFFARNMH LFLMEIENIR 60
61 KAWVSVPNLE DYYENGKGHA AVYVQDAAYR HDERVGSIMM FDQNSEHQVI CEYTPPMTMA 120
121 EMYYLAHRY
|
| Detection Method: | |
| Confidence: | 16.30103 |
| Match: | 1sl6A |
| Description: | Crystal Structure of a fragment of DC-SIGNR (containg the carbohydrate recognition domain and two repeats of the neck) complexed with Lewis-x. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [223-339] |
1 11 21 31 41 51
| | | | | |
1 SEIYPIHVYK HGAIIPTQSY YTITQLQGKE MYNTQELKDA CKGVGNILNV ESFPITAIEQ 60
61 EFEDVKPYLK DHQFSLVDAY KNDGCSSGDY LTEGKQVYLG GTAKTGHCDA HSCIVKF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
