YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE02997
Organism: Caenorhabditis elegans
Length: 460 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE02997.

Description E-value Query
Range
Subject
Range
CE02995 - chitinase status:Partially_confirmed UniProt:Q17834 protein_id:CAA91147.1
370.0 [0..1] [460..1]

Back

Predicted Domain #1
Region A:
Residues: [1-460]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRADLNSTS IPLLRIQNIT RKTNRFAQWK NLINPCLILI AILVISAPVA FSLSELIMVA  60
   61 RHKSETVSNL INMLIPSSQT SRTTMKTNNS PTTKLVQKSN EKVSPPAASC GKRIVGYFAE 120
  121 FENSPLSKKQ LQMLTHIIYL FAIPKNGSLT FRDESSRRKF VAMKNEARKE SSTLKVMISI 180
  181 GGQYSSGEFS GLVSKETSRN LFTNSIVSFV QNYDIDGVDI FWTWPKYSDE NNYLMFIREL 240
  241 RYAFTELQKK LNRKETFVIS LVISRNVNHL SNLVEFSNFV DFLNIYLFNS FLNQIGPDSP 300
  301 LYGGGSRIVD ENMKYYICKS GQPSKFNIIV SFHATYWNGA ELPLRDDSDD IWKDNNSGRL 360
  361 PIALPRRQLR QYNWNLTDIK FHNLTKTSYI WIPGPPTRFM TLEEERSLRE KNRYVADHNI 420
  421 GGITMWTIDQ DDDDHTLLKV VSSAELCTGD EKNTIKYKCE 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 86.045757
Match: 1rd6A
Description: Crystal Structure of S. Marcescens Chitinase A Mutant W167A
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.00445818053203 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle