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View Structure Prediction Details

Protein: CE02993
Organism: Caenorhabditis elegans
Length: 447 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE02993.

Description E-value Query
Range
Subject
Range
gi|109895306, gi... - gi|110431374|ref|NP_001036035.1| chitinase 7 [Tribolium castaneum], gi|109895306|gb|ABG47445.1| chit...
347.0 [0..51] [440..40]

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Predicted Domain #1
Region A:
Residues: [1-447]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSLNTTYNP LLKYHKLSLK TRALTQGENI VKPCVILVAI ILISTPFVFV FSKLIILACC  60
   61 KCQTVSTSIN ALMLNNSTTS QHALKSNETI SPPAALCGKR IVGYFAEFEN SGLTRRHLQM 120
  121 VTHIIYLFAR PTNGVMTLDG ERTRRKFQEM RSKAREVSST VKVMISVGGH DHSGAFSAIM 180
  181 SNEASRSVFI KSIVSFVKNE DIDGIEIFWM WPKHRDVNNY SIFIQDLRNE FTELQKRTNR 240
  241 KNEYIISLLV PKKSYWSFDF EDFLKFVDFF NIYSTQFREK QVGPDSPLYG GEGRNIDETM 300
  301 KYYTCKTGQP SKFNIFVSFH GTFWKDAELP LRNDFDDIFK DKNLTKGAFA VRWRELLQQK 360
  361 WNLEDIKFHN LTKTSYIWIP GPPTWFMTLE DKRSLREKTK YVADYNIGGI TMWTIDQDDD 420
  421 DHTLLKVVSS AELCTGKEKN EINYKCD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 91.154902
Match: 1edqA
Description: Chitinase A, N-terminal domain N; Chitinase A, catalytic domain; Chitinase A
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.00445818053203 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle