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View Structure Prediction Details

Protein: CE02886
Organism: Caenorhabditis elegans
Length: 106 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE02886.

Description E-value Query
Range
Subject
Range
gi|39597043, gi|... - gi|39597043|emb|CAE59270.1| Hypothetical protein CBG02602 [Caenorhabditis briggsae], gi|187037279|em...
gi|157751816 - gi|157751816|ref|XP_001679620.1| Hypothetical protein CBG02602 [Caenorhabditis briggsae AF16]
155.0 [0..1] [106..1]

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Predicted Domain #1
Region A:
Residues: [1-106]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGVDDISSN VHKLVGVTAG MNTAASTGPM NLVLDKCSVV LEELRTIQIL TETHSEGLSE  60
   61 QLKMTEKNIL EMENLFDQID QLCLFVQKAK SDLDKLEKLY NVVDRQ

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Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.981 a.29.13 Description not found.
View Download 0.967 a.24.9 alpha-catenin/vinculin
View Download 0.931 a.24.9 alpha-catenin/vinculin
View Download 0.902 a.29.16 Description not found.
View Download 0.871 a.7.8 GAT domain
View Download 0.866 a.24.14 FAT domain of focal adhesion kinase
View Download 0.864 a.24.2 Aspartate receptor, ligand-binding domain
View Download 0.849 a.24.1 Apolipoprotein
View Download 0.830 f.17.1 F1F0 ATP synthase subunit C


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