| Protein: | snt-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 441 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for snt-1.
| Description | E-value | Query Range |
Subject Range |
|
|
342.0 | [0..1] | [441..1] |
|
Region A: Residues: [1-149] |
1 11 21 31 41 51
| | | | | |
1 MVKLDFSSQD EENDEDLTKE FVRDEAPMEE TTSEAVKQIA TTTKETLKDV VVNKVIDVKD 60
61 VVKEKVMQQT GMPEWAFVFL GFVFILLVLA CAFCLIRKLF GKKRHGEKNK KGGLKGFFGK 120
121 GQDVVDGKNI QGMAQDLEEL GDAMEQNEK
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [150-441] |
1 11 21 31 41 51
| | | | | |
1 EQAEEKEEVK LGRIQYKLDY DFQQGQLTVT VIQAEDLPGM DMSGTSDPYV KLYLLPEKKK 60
61 KVETKVHRKT LNPVFNETFI FKVAFNEITA KTLVFAIYDF DRFSKHDQIG QVLIPLGKID 120
121 LGAVIEEWKD IAPPPDDKEA EKSLGDICFS LRYVPTAGKL TVVILEAKNL KKMDVGGLSD 180
181 PYVKIVLMQG GKRLKKKKTS IKKCTLNPYY NESFSFEVPF EQIQKVSLMI TVMDYDKLGS 240
241 NDAIGRCLLG CNGTGAELRH WMDMLASPRR PIAQWHTLGP VEEEGDKKDD KK
|
| Detection Method: | |
| Confidence: | 73.045757 |
| Match: | 1dqvA |
| Description: | Synaptogamin I |
Matching Structure (courtesy of the PDB): |
|
