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View Structure Prediction Details

Protein: CE02689
Organism: Caenorhabditis elegans
Length: 405 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE02689.

Description E-value Query
Range
Subject
Range
gi|39591546, gi|... - gi|39591546|emb|CAE71122.1| Hypothetical protein CBG17976 [Caenorhabditis briggsae], gi|187025041|em...
gi|157775125 - gi|157775125|ref|XP_001665628.1| hypothetical protein CBG17976 [Caenorhabditis briggsae AF16]
292.0 [0..1] [403..1]

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Predicted Domain #1
Region A:
Residues: [1-162]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASIRPMELE KMPYTEEEPL TCGGKVKRWC KKYLLEGQHL EEGQADKMAN LPENPTFGDL  60
   61 VFIKYRKFVA MLIPFLLIHT IWWSTAIRHN LFQFYNDYWH MPVTMALGSF VGGMTSEGSG 120
  121 AVAFPVMTLA LHIKPEIARD FSLMIQSIGM TSALVCVLFM KV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [163-405]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KFEHRAVIIG CLGAVPGFII GVHYIDPLFS GAQKKMLFVS IWTAFAFALG ILNAQKKRST  60
   61 FREIPEFCAW KGWVLFFTGI IGGIFDAFAG SGIDICIFSV ITLLFRVTEK TATPTTVVLK 120
  121 GVIAVFGFYY RAVMMGDIDI MAWRYFAVSI PVSAATGPIG SFLGSHLHRQ VVAGFVYVLE 180
  181 AIALVGFLCT KPAWQLIAVG GCIILGGFVF FSALSKAGSI LMNRIEIRQE KAAQKAGLTS 240
  241 GTY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle