| Protein: | sra-29 |
| Organism: | Caenorhabditis elegans |
| Length: | 348 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sra-29.
| Description | E-value | Query Range |
Subject Range |
|
|
196.0 | [0..5] | [316..353] |
|
Region A: Residues: [1-348] |
1 11 21 31 41 51
| | | | | |
1 MENLNPACAS EDVKNALTSP IMMLSHGFIL MIIVVSFITT ALAVQTLWYK NVFPFCTKNL 60
61 LLSAIVNGIF HQSTVAEIRL KTVYHLIRYS NAPCSILFQS SDCFYDNFLY YQTALFSSFY 120
121 CVSLFLDRLF SLNPRSFYNS HQTLGFIVFL ILQIICPIAI QFWTFHDSDY TSYVPMCNYP 180
181 PASSVSGTKF YFINDSRIII MGTIFMCSLF LYIHNKSREK RMIFNVYNTD SRYKSYENFL 240
241 ATRAVCIIIF SQITCLGITS FVPSIFNQFR QSISPDWFHL ILAFMAGATY SNFFLPLIVI 300
301 YETQLIIAHR HKLIKKLKSQ KEEFSDHFAS LDFVWEREAN KKKTQLVQ
|
| Detection Method: |  |
| Confidence: | 49.39794 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
