| Protein: | ifb-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 558 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ifb-1.
| Description | E-value | Query Range |
Subject Range |
|
|
291.0 | [0..9] | [556..426] |
|
Region A: Residues: [1-96] |
1 11 21 31 41 51
| | | | | |
1 MEAESAPQAP MSGGRVLKMV TEMGSATVGG ISPALSANAA KSFLEATDKE KKTLQGLNDR 60
61 LGNYIDRVKK LEEQNRKLVA DLDELRGKWG KDTSEI
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [97-423] |
1 11 21 31 41 51
| | | | | |
1 KIKYSESLST ARKDIDDAAR RKAEVDVKVA RHRDDLAEYR SRYEDIQQRR ESDREKISQW 60
61 TNAIADAQSE VEMLRARFKQ LTDEEKRVTA DNSRIWEELQ KARSDLDDET IGRIDFQNQV 120
121 QTLMEELEFL RRVHEQEVKE LQALLAQAPA DTREFFKNEL ALAIRDIKDE YDIIAKQGKQ 180
181 DMESWYKLKV SEVQGSANRA NMESTYQRDE VKRMRDNIGD LRGKLGDLEN KNSLLEKEVQ 240
241 NLNYQLTDDQ RQYEAALNDR DATLRRMREE CQTLVAELQA LLDTKQMLDA EIAIYRKMLE 300
301 GEETRVGLTQ MVEQAVKTHS LQQQENT
|
| Detection Method: | |
| Confidence: | 17.522879 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [424-499] |
1 11 21 31 41 51
| | | | | |
1 DSTRSVRGEV STKTTFQRSA KGNVTISECD PNGKFIKLEN SHRNKDENVG EHKIRRKLDG 60
61 RREIVYSIPA NVVIKP
|
| Detection Method: | |
| Confidence: | 3.67 |
| Match: | 1ufgA |
| Description: | Solution structure of immunoglobulin like domain of mouse nuclear lamin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [500-558] |
1 11 21 31 41 51
| | | | | |
1 GKNLTIYARD QGGINNPPES LVFDGENTWG IGANVVTSLV NKDGEERATH TQKTIQSGQ
|
| Detection Method: | |
| Confidence: | 25.0 |
| Match: | 1ivtA |
| Description: | Lamin A/C globular tail domain |
Matching Structure (courtesy of the PDB): |
|
