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View Structure Prediction Details

Protein: glb-10
Organism: Caenorhabditis elegans
Length: 198 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for glb-10.

Description E-value Query
Range
Subject
Range
gi|187037260, gi... - gi|39597062|emb|CAE59289.1| Hypothetical protein CBG02622 [Caenorhabditis briggsae], gi|187037260|em...
gi|157751778 - gi|157751778|ref|XP_001679601.1| Hypothetical protein CBG02622 [Caenorhabditis briggsae AF16]
215.0 [0..1] [198..1]
glb-7 - status:Partially_confirmed UniProt:Q7YZV1 protein_id:AAP82661.1
162.0 [0..28] [196..7]
gi|4020134 - gi|4020134|gb|AAC96001.1| hemoglobin C1 polymer precursor [Artemia salina]
144.0 [0..8] [172..1092]

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Predicted Domain #1
Region A:
Residues: [1-198]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMGLLSTIRG KKEPVVGNGI GSAQVGPLNA KTKKLVIQEW PRVLAQCPEL FTEIWHKSAT  60
   61 RSTSIKLAFG IAENESPMQN AAFLGLSSTI QAFFYKLIIT YELNDDQVRE ACEQLGARHV 120
  121 DFISRGFNSH FWDIFLVCMA EKIDETLSAY IPDEDKRNEM ILAWQRVINS IVHQMRNGYS 180
  181 DRRKQQLGGT KGGSNNGF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 29.39794
Match: 1oj6A
Description: Human brain neuroglobin three-dimensional structure
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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