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View Structure Prediction Details

Protein: CE02435
Organism: Caenorhabditis elegans
Length: 507 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE02435.

Description E-value Query
Range
Subject
Range
gi|78495751, gi|... - gi|78495751|ref|ZP_00847969.1| Major facilitator superfamily MFS_1 [Rhodopseudomonas palustris BisB1...
199.0 [0..28] [446..432]

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Predicted Domain #1
Region A:
Residues: [1-507]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGADDGAISA DKVDIRLQPL NKNGAQDETD EEAADQIQLR VYKQRWIVLL AVALLNNTNT  60
   61 MSWIGYAPSG NYVNSFYGES SAAWLSMVYM MCTIPVGMFA MWAGREWGLR TAVLIAGWAN 120
  121 GIGAVIRVIS SLDFVPQDLR FPICMTGQGI AAIAYPFIMF LPTKVAGSWF PDTQRAIATS 180
  181 IGVMSNPLGV LMANLISPAI VKSPEHVIWL NIFTCVPSLI AMLIATFGVN RSEPKIPPTF 240
  241 SASKPQMDFV SGMKSCFSSK QYIILLIVMG GGIGMFNCLY TVMLELLCPS GYSNFFSGVC 300
  301 AALMIVGGVF GAAASSIFVD RTKLYEETLK IALGAAVIFG LIFLQLTLHQ GYSVILGVTC 360
  361 LLFGVLGLAT YPIGLELASE CTFPVSEATS TGLIVLSGQI QSVIYVFIMK NFARPLQPDR 420
  421 MHIQVCQLTP DDTINTPKDN TMSIMIFSLL ATLLVLTLVV LFKPVYKRLE AERGNRATAD 480
  481 KAKELSNQNK DRITLQAESA VEPLQKK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.69897
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.795545041075205 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle