YRC Public Data Repository - Protein Structure Prediction

Protein:	CE02385
Organism:	Caenorhabditis elegans
Length:	80 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE02385.

Description	E-value	Query Range	Subject Range
gi\|187031439, gi... - gi\|39590745\|emb\|CAE65117.1\| Hypothetical protein CBG09982 [Caenorhabditis briggsae], gi\|187031439\|em... gi\|157774361 - gi\|157774361\|ref\|XP_001665246.1\| hypothetical protein CBG09982 [Caenorhabditis briggsae AF16]	98.0	[0..1]	[76..1]
gi\|71008864, gi\|... - gi\|71008864\|ref\|XP_758245.1\| hypothetical protein UM02098.1 [Ustilago maydis 521], ref\|XP_399713.1\| ...	95.0	[0..14]	[75..17]
gi\|46121245, gi\|... - gi\|46121245\|ref\|XP_385177.1\| hypothetical protein FG05001.1 [Gibberella zeae PH-1], gi\|42551259\|gb\|E...	93.0	[0..3]	[69..5]
gi\|145009364, gi... - gi\|39949765\|ref\|XP_363224.1\| hypothetical protein MGG_08808 [Magnaporthe grisea 70-15], gb\|EAA51286....	93.0	[0..3]	[62..5]
gi\|40745267, gi\|... - gi\|67523713\|ref\|XP_659916.1\| hypothetical protein AN2312.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	92.0	[0..2]	[68..4]
gi\|238506933, gi... - gi\|238506933\|ref\|XP_002384668.1\| stress response RCI peptide, putative [Aspergillus flavus NRRL3357]... gi\|83776210 - gi\|83776210\|dbj\|BAE66329.1\| unnamed protein product [Aspergillus oryzae] gi\|169786003 - gi\|169786003\|ref\|XP_001827462.1\| hypothetical protein [Aspergillus oryzae RIB40]	88.0	[0..2]	[67..4]
gi\|70997695, gi\|... - gi\|70997695\|ref\|XP_753585.1\| stress response RCI peptide [Aspergillus fumigatus Af293], gi\|66851221\|... gi\|159126684 - gi\|159126684\|gb\|EDP51800.1\| stress response RCI peptide, putative [Aspergillus fumigatus A1163]	87.0	[0..2]	[67..4]
gi\|28949921 - gi\|28949921\|emb\|CAD70907.1\| conserved hypothetical protein [Neurospora crassa]	85.0	[0..2]	[76..5]

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Predicted Domain #1

Region A:
Residues: [1-80]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCQILLAILA IFLPPIAVLL DVGCNCDLLI NILLTCLGII PGIIHAWYII LCKEKTVVQN  60
   61 IYVQTNDHGT APPAYSPYSA

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	25.886057
Match:	PF01679.8
Description:	No description for PF01679.8 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits