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View Structure Prediction Details

Protein: cdc-25.4
Organism: Caenorhabditis elegans
Length: 372 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cdc-25.4.

Description E-value Query
Range
Subject
Range
gi|94428786, gi|... - gi|94499154|ref|ZP_01305692.1| predicted sulfurtransferase [Oceanobacter sp. RED65], gi|94428786|gb|...
214.0 [0..81] [360..45]

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Predicted Domain #1
Region A:
Residues: [1-96]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPIIRCENNT DHITPAPFSA HNICLRGDEL MISHLSCRQR FLTIHADTCR PGNLPARPGT  60
   61 LNIIFKKNLK HKVYPLYSKK IISHLLTLIR IENKML

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [97-372]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KNVNNCLSKN DNLQGIRLDS RLSVEQIPRE DTAVKTPVVR YCLPTVESPQ RESSSFRSIS  60
   61 ATVFASLLRD RSRCLQLIIF DCRYPFEYFG GHIKGAVNIY SLDELGKYLY DEYGVKSTLG 120
  121 GLIPIFYCEY SQVRGPAMAR RLRKIDTHRN NHRAAALDFP EIYLLDKGYV NFWSDVSLRD 180
  181 LCEPRYYISM HARPFRHALQ QYTQHRSKST ANDTKHKKTH MRIFSSEHLL DEPKMIDVPS 240
  241 GYERPTGAEE TSTPRQPRAR TPRARLLFEP CFTEID

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.154902
Match: 1cwrA
Description: CDC25b
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.157249563453524 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle