YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE02240
Organism: Caenorhabditis elegans
Length: 336 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE02240.

Description E-value Query
Range
Subject
Range
gi|187033162, gi... - gi|39596749|emb|CAE63368.1| Hypothetical protein CBG07778 [Caenorhabditis briggsae], gi|187033162|em...
gi|157771698 - gi|157771698|ref|XP_001677669.1| Hypothetical protein CBG07778 [Caenorhabditis briggsae AF16]
286.0 [0..1] [332..1]

Back

Predicted Domain #1
Region A:
Residues: [1-336]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPGNKSITI TPVVYLLLTF FHSVSGYALY REVEAEQFLN LAAAAYADAS NVTARQSCLD  60
   61 YAFPTDEFHV LMVMSTPCDR RGNQCQAFIA ISDSTNQVII SFRGTNSGGQ LLSEFGVGLE 120
  121 DYAAYTEIDG SNNTVSVGHV NVYFLDAMNQ MWEDMVQPSI KNRQNYTFLI TGHSLGGAMA 180
  181 TLTAFRIAFR QFSSRIKVHT FGEPRVGDTV FASYFTDMVP YAFRVVHNTD PIPHLPPLNV 240
  241 ANEAGPGMPY HHPREIWYND DFSNYVMCSD VNGEDWSCSD KKRFWNYGSK GAYRHTHYFN 300
  301 HFVSEYGALG CNSTPHKQTI LLSIFVPIFA IFSFYL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 48.522879
Match: 1lgyA
Description: Triacylglycerol lipase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.866238607554457 bayes_pls_golite062009
hydrolase activity 0.52702612560045 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle