| Protein: | CE02157 |
| Organism: | Caenorhabditis elegans |
| Length: | 583 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE02157.
| Description | E-value | Query Range |
Subject Range |
|
|
409.0 | [0..1] | [583..1] |
|
Region A: Residues: [1-377] |
1 11 21 31 41 51
| | | | | |
1 MDANTTWPTI DWCFNMEMWL HTMATQNISQ QMRSKYAHYK TFSYRYNGLL TLVLILLGLT 60
61 GSSLLLKQIY GSRVFSKRLA VHLGMICFWD IIYLLCCLST YCIPSLIYSV TPIYGPFSYI 120
121 LFFLQPFASF CVSCTIWQVF AITLERYLAV SSPLEQRTRK AKFGVGWICV AITFCAFILN 180
181 LLPVPFENEL VDCYEINFDS NGLPMFRNHT MMKPYYDDKI RIYRFLVHFF PDLLFRAPTP 240
241 IIVIGTLTVK TIQACSQRSV GNFQIGMRFN RNMPLRLSLL NFKFILCNTL YMFNTILLEL 300
301 LEYGNMENGD YDGYINSFYL TDASNMLLVV HSATNWLLFY KFPSCRKKDA VSMTLSTSIK 360
361 YSSIKHRVAE YISKQIS
|
| Detection Method: |  |
| Confidence: | 44.30103 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [378-583] |
1 11 21 31 41 51
| | | | | |
1 PLASALGVDI IHRLCEDISE VRNIIHGKLG KESEKQERET LVGLEFGHFI RDVFRWFGDR 60
61 NRRVSKKIVY KQYSDAAIKA KINFKAPEWK TIRTIVVEMI VTHLVAHAKE TNCKGVMHSK 120
121 VEMEECATRV FNQVLSEMKN VALCANVEEK QKARAERFIR SNSTTTAMPI FREPPRKSHS 180
181 VSMRFQYSTS VDSVQQCEQQ ILIHKV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
