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View Structure Prediction Details

Protein: CE02103
Organism: Caenorhabditis elegans
Length: 417 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE02103.

Description E-value Query
Range
Subject
Range
gi|115932072, gi... - gi|115932072|ref|XP_001188803.1| PREDICTED: similar to Pigm protein [Strongylocentrotus purpuratus],...
417.0 [0..22] [405..13]

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Predicted Domain #1
Region A:
Residues: [1-83]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQCVRSFVKN ETFNRNKILL VAFVARIILV FYAHIHDYLF KVNFTDIDYH VFSDAAKHVS  60
   61 NGGSPFDRAT YRYTPALAWI LLP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [84-245]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VVHFPDFGKI LFCIFDILVA ILYFKIMEKD LNETKSETRE EMKDDQTMNV VIYWLANPLT  60
   61 AIISARGNAE SIVAAVVLLN IVLLQKGYWK SAALVHGALA IQLKIYPLIY LPSVFLSLST 120
  121 IGEQSCVVNK FKSLVSNWKG FAYMLVTLTS FAAVVLFFFQ IY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [246-417]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GQLFLDEYLI YHVKRRDLAH NFSPYFYLLY LYEANPTMSQ IIGLGAFIPQ IVLIVFFAFK  60
   61 HYDDLPFCWF ITTFAFVTYN KVCTSQYFVW YIVLLPLLAH KIMMSRQLAL SLMAAWFATQ 120
  121 GIWLLAAYLF EFQGWNTFFL MFLASCLFLI ANSFILKQII NHYVPIVKPK TD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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