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View Structure Prediction Details

Protein: ins-4
Organism: Caenorhabditis elegans
Length: 106 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ins-4.

Description E-value Query
Range
Subject
Range
ins-7 - status:Confirmed UniProt:Q23430 protein_id:CAA92498.1
117.0 [0..6] [104..4]
gi|157753258 - gi|157753258|ref|XP_001680341.1| Hypothetical protein CBG07862 [Caenorhabditis briggsae AF16]
gi|39592342, gi|... - gi|39592342|emb|CAE63419.1| Hypothetical protein CBG07862 [Caenorhabditis briggsae], gi|187033109|em...
116.0 [0..1] [105..1]

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Predicted Domain #1
Region A:
Residues: [1-106]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSFFTYFLL SALLLSASCR QPSMDTSKAD RILREIEMET ELENQLSRAR RVPAGEVRAC  60
   61 GRRLLLFVWS TCGEPCTPQE DMDIATVCCT TQCTPSYIKQ ACCPEK

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.5
Match: 3lriA
Description: Insulin-like growth factor
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.182470373231634 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle