| Protein: | CE01968 |
| Organism: | Caenorhabditis elegans |
| Length: | 662 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE01968.
| Description | E-value | Query Range |
Subject Range |
|
|
732.0 | [0..255] | [659..17] |
|
Region A: Residues: [1-239] |
1 11 21 31 41 51
| | | | | |
1 MEEYLVMLKN LKEEYEKEPT HLSSVSPRAN DSMLLRRIQL AHTSKSRPTL QRTSPEVARF 60
61 IGSPMEIDNL GISRSDTIAE KSSFLDPTMM MDKTTHERGF LADVSDMNGT VRSRQASFHF 120
121 NYTSPVPAEK TRRSSGIQHA NSTIDFDADV SSFFDSTQIH RRSRQQAGRE PSIALINDGL 180
181 RTPITLNNTI LLSDSETTPT NLQTLWNVKL RPGSNRKIDN EIRKEIQRQL ACDPQFLTM
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [240-662] |
1 11 21 31 41 51
| | | | | |
1 LKLLLPLLIY PVPFFAQNLV IDVSRNAIQE YVSSMSTHFK DEILKAKLPP MDASRFICGV 60
61 TLKDTTVTDF NFSKFSSELA GPYKDYYLNI TDFSFTISGS YVRNFLFFKF YDTFSVKIKF 120
121 KNVSLGALVP TFANGYPFLH GVINCGFSPE TVEDPVTNGW FVTSLIREAV EENIKEAICH 180
181 ILVQLLDSKI RSDIHELQVD FPIFSNTSEM SFRMFKKAPY TSSTKQIRYF LEGEIEYPAS 240
241 EPAVFLPNEV SDEIPKRHVA YHIHEKLLAE MLEAMCEKGL FDGNFTSLPS MKPVSYLCLS 300
301 ASAKIQGISN TITIIIHITS LETYPDDQEK SQLRSFMVTP LHNSEHELFI RLKSQLANRW 360
361 LDNTFTEQLF NHLSVVLSDN FRLPLPFIHN SSISDVIFLP NADYFTILSN FDFHQNDSQF 420
421 RNR
|
| Detection Method: | |
| Confidence: | 1.22 |
| Match: | 1ewfA |
| Description: | Bactericidal permeability-increasing protein, BPI |
Matching Structure (courtesy of the PDB): |
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