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View Structure Prediction Details

Protein: CE01923
Organism: Caenorhabditis elegans
Length: 510 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE01923.

Description E-value Query
Range
Subject
Range
MURE_CALS4 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase OS=Caldanaerobacter subterrane...
MURE_THETN - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase OS=Thermoanaerobacter tengcong...
356.0 [0..7] [492..19]

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Predicted Domain #1
Region A:
Residues: [1-510]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLLPQTNRI LLPTTSSTAC GANQLRMSSE KAVPCYEESV RLLNGLQSNA ATIKKLRVQR  60
   61 ENLQAINLPQ CRKYLESLNI SAEDLNALNI IHVSGTKGKG SACAFVESIL RSQGLRTGFY 120
  121 SSPHLVHVRE RIQVDGQPVS EQMFAEEFFH VYDIIKREHS DNMPAYFKFL TLLAFRIFVK 180
  181 LNVQVMILEV GIGGEYDCTN VVEKPKVCGV TTLDYDHMSI LGNKLSEIAW HKAGIFKESV 240
  241 PAFYSPTTTE AEEVLIARAI SKHVPLFQTP PVSAYQFARD ISPGIRGAHQ FSNVSMALQL 300
  301 VRAWAEKCGF PLPGVPLSTD TSGFNVPLWM CDAIESCRWP GRSQIVSTDR NVTYLLDGAH 360
  361 TPKSMEACSE WAAEEIVNLK KENVKKILLF QCTADRCPST LIKYLKPLGI SQIVSCPTQL 420
  421 HSSIDKSADS ANLNASRDEQ AEKANQCVQA WKESLDQPES VTEDQMKVFD CISSAYKFIE 480
  481 SQAASQEILV LVTGSLHLVG GVLNLAGKGK 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 71.522879
Match: 1w78A
Description: E.coli FolC in complex with DHPP and ADP
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle