YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE01707
Organism: Caenorhabditis elegans
Length: 472 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE01707.

Description E-value Query
Range
Subject
Range
gi|150016972, gi... - gi|82747995|ref|ZP_00910486.1| 4-hydroxybutyrate coenzyme A transferase [Clostridium beijerincki NCI...
470.0 [0..33] [468..5]

Back

Predicted Domain #1
Region A:
Residues: [1-472]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLKLAKQLS KSSVISLSRH FTNGPRLPTK LLHAKPGFVP KYVSADEALA MVNSDSDIYV  60
   61 GNHASAPNVL LEALCRRVDS ANLNNIRMSH LILSGNCPQF DPKYHGKIQN NSLFICPGNR 120
  121 KNVNLGAADY TPIFLSEVPS LYTSGTLNVD FALITVSPPD ELGFCTLGVD IDTTLAAATS 180
  181 AKKIIALVNS TMPRTRGHTT VHSSHFAAMV QTDRPIAFRQ SGGEEMSETE QRIGKIIAEN 240
  241 LVDNGATLQL GIGAIPDSAL AAMKQHKDLG VHTEMFSDGV IDLIDRGIIN NQKKAFMPGK 300
  301 TVSSFAFGTK EFYKKIDNNP EFYFAPCDFT NHIDIVRRNS KMTSINSAIE IDLTGQIVSD 360
  361 SIGRNFFSGF GGQVDFMAAS PHGFDGLGKA IIALPSRTTK GQTKIVPFLT QGSGVVTTRA 420
  421 HARYIVTEHG IANLWGKSIR QRAYELIQIS HPDDREALEK AAFDRFKVMP SA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 112.0
Match: 2oasA
Description: No description for 2oasA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle