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View Structure Prediction Details

Protein: CE01674
Organism: Caenorhabditis elegans
Length: 407 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE01674.

Description E-value Query
Range
Subject
Range
gi|47229253 - gi|47229253|emb|CAG04005.1| unnamed protein product [Tetraodon nigroviridis]
243.0 [0..74] [384..19]

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Predicted Domain #1
Region A:
Residues: [1-407]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTPKNYIKI SIDEKNDRRD NVTANENCSR NRIKKGIFVL IGICVVFAFA NNAMGHPAKE  60
   61 NDESSSEIPP IENDIASTTQ IIPTVPLLTD SSGSEKPPDK VTFVLFAADR IGFDGSVEVD 120
  121 HSSRTFSKLK EKSKIESSHF KKLLSIGGRS NTQFLPLVIA DPRRKRRFFK SIISILEEYQ 180
  181 LDGVDLLWKW AKNSNTKKCS RFLCELKQKL KERKKNYVLS VQILPDEPSS WELFNPANGS 240
  241 PLNIQVEDCN TGPDTEVVEP SDSELESTEN NSKKLTVDIF KFCYITSDGN LQFEDEIAMK 300
  301 LFLKLKEQAR SENLKLELIF KIDGRTNTFL FSSVILAHDK KRKFINSVIS FLKEYRLGNS 360
  361 DLIWKSTRSS FRVEYFRFLD EFKSEIKERK RNYILSKVVR PPLGFSL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 51.30103
Match: 1w9pA
Description: Specificity and affinity of natural product cyclopentapeptide inhibitors against Aspergillus fumigatus, human and bacterial chitinaseFra
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.00445818053203 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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