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View Structure Prediction Details

Protein: CE01644
Organism: Caenorhabditis elegans
Length: 719 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE01644.

Description E-value Query
Range
Subject
Range
CE03637 - glycerophosphoryl diester phosphodiesterase domain status:Partially_confirmed UniProt:Q10003 protein...
585.0 [0..1] [719..78]

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Predicted Domain #1
Region A:
Residues: [1-106]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVARPVRVH FAVDVENLHA HQSVYVVGSN DVLGTWEATR AMPLVQDPDR FMRWKGSIVT  60
   61 DVHQLKFRYF IGYNLMSDQG ERLIVDKWEA FLHPRSTLCL AESRND

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.0
Match: 1kckA
Description: Cyclomaltodextrin glycanotransferase, domain D; Cyclodextrin glycosyltransferase, C-terminal domain; Cyclodextrin glycosyltransferase
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [107-256]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ECRVDRVDLF GYYAGRKCVS DGWLQYPDEN QILLRLHGNA LKFYKTAKER KNCRVKMTPL  60
   61 DVRFKAPPSG HISFSYGEDE EDEEEDQNVP SNKCTHSATH VAVLSDPRPK FYDQEDTGVT 120
  121 FNNNKDYLVF RTHCLAAEFL AFYIEIFSEE 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [257-651]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RKRIGACYAL PSSLQDASGI IHLPFINSSG RPIGQVSIEY LCVRALTRLD GPQFMDQTYC  60
   61 RHWKKRNALE VGHRGAGNSY TKFAMARENT IHSLNTAAKN GADYVEFDVQ LTKDRIAVIY 120
  121 HDFHVLVSVA RRDGLAMPPP MTREQLDSSN LDYHELPVKD LKLSQLKLLM LDHLSFPQKK 180
  181 ENVKKLVEAG EEEEDFKPFP TLLEALTKVD PDVGFNVEVK YPMMQNNGEH ECDHYFERNL 240
  241 FVDVILADVM KHAGNRRIMF SSFDPDICSM VATKQNKYPV LFLCVGETQR YTPFQDQRTS 300
  301 TSMTAVNFAA GADLLGVNFN SEDLLKDPMP VKKANEFGMV TFVWGEDLDK KENINYFKKE 360
  361 LGVDGVIYDR IGEEERRRNV FIVEREQKRA LLSCS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 58.0
Match: 1ydyA
Description: Crystal structure of periplasmic glycerophosphodiester phosphodiesterase from Escherichia coli
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.322782393124324 bayes_pls_golite062009
hydrolase activity 0.114597543302679 bayes_pls_golite062009
phosphoric ester hydrolase activity 0.10444517300189 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.0391669406455814 bayes_pls_golite062009
phosphoric diester hydrolase activity 0.0229452028027644 bayes_pls_golite062009

Predicted Domain #4
Region A:
Residues: [652-719]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GASTPQRAAS PSPVSSENNN TSPPHSAKLT RNAQSDSALL EENEDDVEHL SDKLNITGFQ  60
   61 SAPMVSTK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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