| Protein: | CE01578 |
| Organism: | Caenorhabditis elegans |
| Length: | 370 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE01578.
| Description | E-value | Query Range |
Subject Range |
|
|
367.0 | [0..33] | [370..1] |
|
Region A: Residues: [1-186] |
1 11 21 31 41 51
| | | | | |
1 MQNNLVLLIL SILSIFEVSA YSNVEKGAAA RARCWTSGNG RPAQWWQEGD QVTRGKYFYE 60
61 CRRGQLEPLG CLSSTEEKIP LGHTFQQDRY EFICQLGSDG YIEFGYSACV GTDGRTYQKG 120
121 ETWTDAKNTY YYRCRDDGRV VKTTIEGCIA HDKQRRVPLG QTDDFNGYTY KCQQKTTGVV 180
181 QMCSVG
|
| Detection Method: |  |
| Confidence: | 15.30103 |
| Match: | 1e88A |
| Description: | Fibronectin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.871211641941331 | bayes_pls_golite062009 |
| protein binding | 0.337272546666978 | bayes_pls_golite062009 |
|
Region A: Residues: [187-252] |
1 11 21 31 41 51
| | | | | |
1 CIHEGTRYTV GQQYRDGDYL FYCKLQGGKC TKQCIGCVAG GQDLYDGQRY KRDGTTYQCE 60
61 IRPGKR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [253-370] |
1 11 21 31 41 51
| | | | | |
1 SHRAVGCSIV ENGRDINKVI GCRWYEQNPD WKIEKTCETD GDNKTKVTTV GCIYKYKGFD 60
61 RIFLEPGKYT IWNLPKQKDS SVGLACRKTA DGAELVIFDV AQLERNTSGL KYDLPRGK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
