| Protein: | sel-8 |
| Organism: | Caenorhabditis elegans |
| Length: | 468 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sel-8.
| Description | E-value | Query Range |
Subject Range |
|
|
201.0 | [0..2] | [466..216] |
|
Region A: Residues: [1-383] |
1 11 21 31 41 51
| | | | | |
1 MKPSTSKTTH SPPPEEPTAP FVNDNLPNPE DEPTIGDLNA FHSGEELHRQ RSELARANYE 60
61 KARPEMIANQ RAVTAHLFNR YTEDEERKRV EQQKNKEAMN ASTSAPTSSR NGGQSVENRK 120
121 RRNDVVVAPP TSEEEWKRAQ QQHWMGQQQP QMQFQMQQQY HSQQQQYIMM QQQHHHMTGM 180
181 QQIHHQMPST SSADSIRSVP TPASSMHQPS PAEMRNGCGM SRNATMDMTC SPMSGGQPIV 240
241 DENNLAVPEG EWFDKLALAV AEQYNVDTIL GPDTYDTFLA ELDFSSSESP TKQSPMEMNG 300
301 DRMPSTAPPP AQNPQHIAQL QQQQNKMRLM QQQQQEMQRI EQQRRQQIMQ QQQQQQQQEH 360
361 QRQQMLLQQQ QQQQQMQQHH QMN
|
| Detection Method: |  |
| Confidence: | 12.0 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [384-468] |
1 11 21 31 41 51
| | | | | |
1 GGGQFATQAH QQAAYMQQMQ RMEQIRHQQQ QAQQHQQAQQ QHQQQAQHHQ MGYGIPNGYP 60
61 QQMHMHPPAY GAHHMPQPTA FANIN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
