| Protein: | zyg-11 |
| Organism: | Caenorhabditis elegans |
| Length: | 799 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for zyg-11.
| Description | E-value | Query Range |
Subject Range |
|
|
355.0 | [0..1] | [676..134] |
|
Region A: Residues: [1-685] |
1 11 21 31 41 51
| | | | | |
1 MDHNAALTTC STSAIPRLAR LATERIAELI ENDALPEFDH KVIASCSNDI FEVLRQKKKL 60
61 NHQTLQTMCS TSRFQINKID LMGNKVELQD LELCSNQNLV SFRLGDIDYF PNTNKIQVAD 120
121 VLDTALNRTS RQQLRHLDLS GRHRITSNWP TYVARKLPRL ESLAFANRST ANETLSQIGA 180
181 SLLNLRFLDI SSTCVTDISC ISSLRNLEVL IMYNLNILKG DVTETLSNLT KLRVLDISRK 240
241 VNTDYLQETS QDAHLDLALG IYNRSVEAIE SGTATPWAEL RAIDMSGLSI VQFGTDRALA 300
301 FVEKIIEAHP KLEQISLLAT PLDSSLIEIP NRNLQVINTV SRRSIIFALS HYANLDRPAF 360
361 ITHALHSVYY QLQSGYDKFS QEELKECLRL VCISMQQGLN TLPVQIAGSA CLYHLCKMKR 420
421 IKRLSVKEVN NCIERSLDAA EQYRSMTQLQ KNVWLTICND YLLHLDEIDF YRTCKVALDT 480
481 MLLNRDASVE RMTIAIVSIV TPKMRPSEAK ILTTETKYVY HLVKIMNDYL EAYTREHRVG 540
541 HERDNENALY TLKFTLSALW NLTDECPATC KAFLDAGGVQ IAFRILKAFD YHGNVQTKVL 600
601 GILNNLAEVE ELHLGQLCKN EYISVLISCL DGSFNEVDSK GRYREVERSY FAAGILANLL 660
661 TNTDGWESEN QRDEACEKLL ELIEQ
|
| Detection Method: |  |
| Confidence: | 26.522879 |
| Match: | 2a0zA |
| Description: | The molecular structure of toll-like receptor 3 ligand binding domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [686-799] |
1 11 21 31 41 51
| | | | | |
1 YPTLPSAMVS YKSFIPFSRI VRESNSNGAI MWCLWGVHHV LQHREKNKAP TYEKGYIEMF 60
61 MDSGLSPIVE DMSHGHSKHI HNLDIRVVHL AREIIDIVSC HSLSSSPVRL VRRV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
