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View Structure Prediction Details

Protein: CE01469
Organism: Caenorhabditis elegans
Length: 212 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE01469.

Description E-value Query
Range
Subject
Range
CE35822 - status:Confirmed UniProt:Q7JMK4 protein_id:CAE48493.1
377.0 [0..1] [212..1]
gi|157773377 - gi|157773377|ref|XP_001664753.1| hypothetical protein CBG09062 [Caenorhabditis briggsae AF16]
gi|39584951, gi|... - gi|39584951|emb|CAE64375.1| Hypothetical protein CBG09062 [Caenorhabditis briggsae], gi|187032145|em...
314.0 [0..7] [212..8]

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Predicted Domain #1
Region A:
Residues: [1-109]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEHFHGNRWD QLRAVEADIL CPPPADPFQI FPSGWTRASE LSEKGWRELL DRRRSQSPPP  60
   61 REPSPDVRRA IRRTPPPRVN RVAPIRLPER RPLRQLNAND ARRPAQDAA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [110-212]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NRINQENMRA GNIDNGQPRR RALSPTQLPG VRAIPKDFNR FFRGLLTPGE FFAKSQTRYL  60
   61 GPFDEMPTED TLPAADEYII LQRMGRLPDS GKSIFRQVGN LST

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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