| Protein: | sra-4 |
| Organism: | Caenorhabditis elegans |
| Length: | 329 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sra-4.
| Description | E-value | Query Range |
Subject Range |
|
|
196.0 | [0..11] | [318..28] |
|
Region A: Residues: [1-329] |
1 11 21 31 41 51
| | | | | |
1 MSLTKCASKL EIDRLISLNF RINQIIVLIP VFITFIFTYY AIKVVQKKSI FELSTKFLLI 60
61 QNFFSANLHQ VLYAIETIRR LHISLFETNQ PCIPLKTEFE CRLYLEVFVS GVAGMVYGQT 120
121 GLLLERACAT FIKNYEEKKS VRTGLAISVS VLCLSFITSR LIIWDDPLDG YQLTCISFPS 180
181 DSVDRSSYFQ SICTLLALFN LVTSILIWKY NKKFEYSTPF VVGPRFRKRE VIDSTSTICF 240
241 LTFVQFIFFL VYSLGFFIIK SIREIISYEN YYLVAVWLYT PPYIAASFPI LIFYRIRSSY 300
301 ANRVLIIKKF TNTKQTIEEH IQQMKNAWK
|
| Detection Method: |  |
| Confidence: | 49.69897 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
