| Protein: | sra-3 |
| Organism: | Caenorhabditis elegans |
| Length: | 329 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sra-3.
| Description | E-value | Query Range |
Subject Range |
|
|
211.0 | [0..3] | [315..353] |
|
Region A: Residues: [1-329] |
1 11 21 31 41 51
| | | | | |
1 MSSQKCASHL EIARLESLNF KISQLIYFVL IITTLFFTFF ALKVIQKKCI FQLSTKILLY 60
61 QNLFSANIHQ IFLGITIVER LNIAFFKLND KCIPLRPETN CQLYLEMFIA GLSGMVYGQT 120
121 GLLFERACAT FIKKYEKRKS LATGIITSII VLLLSGSTAR IIIWDDPLSE YQLACTSWPS 180
181 KSRDRSTMFF SICTFISLFN LVISLLIRRH NEKLEYSTPF VVGPRFRKRE VIDSTSTICF 240
241 LTFFQFIFMF IYSFGVFLLG TIREIIGYEQ YYFWVVWVYT IPFIAASFPI LLIYRIRYSN 300
301 TNRIMIIKQF TSTKQTQEDH IKQMKNVWN
|
| Detection Method: |  |
| Confidence: | 41.69897 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
