| Protein: | sra-6 |
| Organism: | Caenorhabditis elegans |
| Length: | 329 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sra-6.
| Description | E-value | Query Range |
Subject Range |
|
|
199.0 | [0..3] | [310..353] |
|
Region A: Residues: [1-329] |
1 11 21 31 41 51
| | | | | |
1 MSNLSCAAPD VLERLDSFNM KLSQFVDLLA IILAFFASYF AIKIVINQSF FELSTKILLL 60
61 QNLFYTNLYQ ISYGIEAIGM LYRGFFMLSE PCSILQSETS CAPYFKVLMI GTSGMIFGQT 120
121 GLLIERAFAT FATTYKTKKS VYIGVCISLI VLVCSTSSGF IILWDDPLEG WTIGCFAVSK 180
181 SVVPRFNLFS ILSTVLTLFN LIVSIFIQRY NKRFEFETRF KVGARFQKQE LIESTGAICF 240
241 LALSQFLWMF MYSFGILILR IIREDILPST FYFWIAWCYT MPFIALMFPV LLIYRIRKTR 300
301 ARRTEKMKGI TTEKQTQDDH IKQINAMWT
|
| Detection Method: |  |
| Confidence: | 46.0 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
