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View Structure Prediction Details

Protein: ttr-32
Organism: Caenorhabditis elegans
Length: 139 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ttr-32.

Description E-value Query
Range
Subject
Range
gi|39582017, gi|... - gi|39582017|emb|CAE64448.1| Hypothetical protein CBG09155 [Caenorhabditis briggsae], gi|187032066|em...
gi|157776251 - gi|157776251|ref|XP_001666191.1| hypothetical protein CBG09155 [Caenorhabditis briggsae AF16]
197.0 [0..1] [139..1]

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Predicted Domain #1
Region A:
Residues: [1-139]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFLLVLFAT VSCTFAIGFK QSVAVKGKLI CNDDPAKDVR VKMYDKDVLM DTKLDDKSTD  60
   61 GNGEFYLTGG DSEISSIDPR VNIYHDCDDG WTPCQRRLTI GVPDKYITNS DKPTKVFDLG 120
  121 TIQLAGKWVG ETRDCIHRH

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 53.79588
Match: PF01060.14
Description: No description for PF01060.14 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle