YRC Public Data Repository - Protein Structure Prediction

Protein:	fis-1
Organism:	Caenorhabditis elegans
Length:	143 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fis-1.

Description	E-value	Query Range	Subject Range
gi\|114615095 - gi\|114615095\|ref\|XP_001143081.1\| PREDICTED: similar to Fission 1 (mitochondrial outer membrane) homo...	193.0	[0..1]	[143..253]
gi\|38106670, gi\|... - gi\|39975997\|ref\|XP_369389.1\| conserved hypothetical protein [Magnaporthe grisea 70-15], gb\|EAA52947.... gi\|59802875 - gi\|59802875\|gb\|AAX07651.1\| hypothetical protein [Magnaporthe grisea]	181.0	[0..1]	[143..15]
FIS1_NEUCR - Mitochondria fission 1 protein OS=Neurospora crassa GN=fis-1 PE=3 SV=1 FIS1_NEUCR - Mitochondria fission 1 protein OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / D...	179.0	[0..1]	[143..14]
gi\|115384252, gi... - gi\|115384252\|ref\|XP_001208673.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	179.0	[0..1]	[132..10]
FIS1_EMENI - Mitochondria fission 1 protein OS=Emericella nidulans GN=fis1 PE=3 SV=1 FIS1_EMENI - Mitochondria fission 1 protein OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NR...	179.0	[0..1]	[141..16]
FIS1_TUBBO - Mitochondria fission 1 protein OS=Tuber borchii GN=FIS1 PE=2 SV=1	178.0	[0..1]	[143..16]
gi\|159129723 - gi\|159129723\|gb\|EDP54837.1\| mitochondrial membrane fission protein (Fis1), putative [Aspergillus fum... FIS1_ASPFU - Mitochondria fission 1 protein OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / ... FIS1_ASPFU - Mitochondria fission 1 protein OS=Aspergillus fumigatus GN=fis1 PE=3 SV=1	172.0	[0..1]	[143..12]
gi\|119190031, gi... - gi\|90304408\|gb\|EAS34039.1\| hypothetical protein CIMG_05063 [Coccidioides immitis RS], gi\|119190031\|r... gi\|240110997 - gi\|240110997\|gb\|EER29150.1\| Tetratricopeptide repeat containing protein [Coccidioides posadasii C735...	171.0	[0..1]	[142..15]
FIS1_RAT - Mitochondrial fission 1 protein OS=Rattus norvegicus GN=Fis1 PE=1 SV=1	171.0	[0..1]	[143..9]
FIS1_MOUSE - Mitochondrial fission 1 protein OS=Mus musculus GN=Fis1 PE=1 SV=1	170.0	[0..1]	[143..9]

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Predicted Domain #1

Region A:
Residues: [1-143]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPESILDFH TEQEEILAAR ARSVSRENQI SLAIVLVGSE DRREIKEGIE ILEDVVSDTA  60
   61 HSEDSRVCVH YLALAHARLK NYDKSINLLN ALLRTEPSNM QATELRRAVE KKMKREGLLG 120
  121 LGLLGGAVAV VGGLVIAGLA FRK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	41.69897
Match:	1pc2A
Description:	Solution structure of human mitochondria fission protein Fis1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
binding	0.02652482814057	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: