| Protein: | fsn-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 332 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fsn-1.
| Description | E-value | Query Range |
Subject Range |
|
|
198.0 | [0..3] | [328..169] |
|
Region A: Residues: [1-151] |
1 11 21 31 41 51
| | | | | |
1 MAENDGETIV PDEQCNLTAS TPMKSSGLEQ VESPKERKTS MVECDDEGNP SSGTPDESPK 60
61 QLTPHSIPPR RRRSPRRPEV SASRLPLKVL NQIFQYLPLK DLRSAMLTCH SWNNALSMED 120
121 SDIWQYLLGK KLPEAAVSDP FLLAELGSAK K
|
| Detection Method: |  |
| Confidence: | 4.0 |
| Match: | 1fs2A |
| Description: | Skp2; Cyclin A/CDK2-associated p19, Skp2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [152-332] |
1 11 21 31 41 51
| | | | | |
1 KLRAWYFAWN TSDISRNNYI RTNGFTVHRQ PVAQSTDGVR GKRGISKGVH AFDITWDGPL 60
61 GTVAVVGIAT KHAALHCVGY VALLGSDDQS WGWNLVDNVL MHNGAQLGVY PKMNNPPKYE 120
121 VGDKIRLIID CDTHVAYFER NSEFLGIAFN HIPPLRLYPA VCAVYGNTEV TMVYVGSPQM 180
181 G
|
| Detection Method: | |
| Confidence: | 29.522879 |
| Match: | 2ihsA |
| Description: | No description for 2ihsA was found. |
| Term | Confidence | Notes |
| binding | 1.49960529341364 | bayes_pls_golite062009 |
| protein binding | 0.501917973797597 | bayes_pls_golite062009 |
