| Protein: | CE01089 |
| Organism: | Caenorhabditis elegans |
| Length: | 339 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE01089.
| Description | E-value | Query Range |
Subject Range |
|
|
159.0 | [0..26] | [320..139] |
|
Region A: Residues: [1-90] |
1 11 21 31 41 51
| | | | | |
1 MSNEGSREES REPEAREGKS DEIFEVEKIL AHKVTDNLLV LQVRWLGYGA DEDTWEPEED 60
61 LQECASEVVA EYYKKLKVTD KTELIELLQK
|
| Detection Method: |  |
| Confidence: | 7.522879 |
| Match: | 1pdqA |
| Description: | Polycomb chromodomain complexed with the histone H3 tail containing trimethyllysine 27. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.29119158874597 | bayes_pls_golite062009 |
| protein binding | 0.92128574628879 | bayes_pls_golite062009 |
| chromatin binding | 0.147288588666239 | bayes_pls_golite062009 |
|
Region A: Residues: [91-156] |
1 11 21 31 41 51
| | | | | |
1 QIKKNKSQKS KKRSKTVSDH ESNHDSDGSY GTPKTSKKSK KSAKNETPVS SKVPKVPTKA 60
61 ALKSYE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [157-339] |
1 11 21 31 41 51
| | | | | |
1 ATVSGPVAPN NAKKAAMEVR DTRRNWLDEE SSDDEAETTA PLSDVEKIAS KVKVVKAVEE 60
61 KAEEPVKRPS TPPKPREVVI KKDPSESPVA SASSVIPTSK RKSINAETSN GRQRTLAPPV 120
121 IVKDETTWTV DGIARHTDVD NTKTKLILMT NSATGERKVV EGREAFELDG WALAKYLLDR 180
181 CEF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
