| Protein: | CE01020 |
| Organism: | Caenorhabditis elegans |
| Length: | 520 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE01020.
| Description | E-value | Query Range |
Subject Range |
|
|
229.0 | [0..3] | [518..2102] |
|
Region A: Residues: [1-154] |
1 11 21 31 41 51
| | | | | |
1 MFKNLKNRLD NEAGKLKQSA QQYGEQLAAQ VGQYRQAMNE QPAGSDASAS ISKRFTGESG 60
61 ETKAENPANT SIESSSAIMS EIPEADLLGL GLSSTESPSN RRRRSPSEDS IHSNESTLAA 120
121 LLQSIPNAIS SALETIPSDS ESVASDAFSV RSTN
|
| Detection Method: |  |
| Confidence: | 9.045757 |
| Match: | 2tmaA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [155-520] |
1 11 21 31 41 51
| | | | | |
1 DPAYNSRLKQ RLATYKAKYR DAVHRHNKLV DDVNTTRKLL ETTQDECLQK VEKLRLEKRI 60
61 LAEKLSNSAG NGDGKEELEK KCEDYKRMLE QCKIKIKSLQ QDKKEQQQLI TVDNDDSVDP 120
121 RIREMEQRIQ KTEEEWTNRI NESDQQHAIN LATTKAEMHA ALENKDSEIE QWRRKCATLE 180
181 QQDADANQRW SDKVEKVQAM NKALESEKNE MIEKLSEAKA QGVKAVLEEE ERKRTEMETD 240
241 LNDEIERLKE ETEKMRLEMS TYKVQLEAKE SREFDEERED VEALKLELNA VKSTRDDLES 300
301 RITENSSSFE NYRSEAEKTL AAAKAQLVLK FFFSASKGNG GRDSMLAHHF FFFSVIFPRI 360
361 SPNFMF
|
| Detection Method: | |
| Confidence: | 16.69897 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
