| Protein: | glb-17 |
| Organism: | Caenorhabditis elegans |
| Length: | 216 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for glb-17.
| Description | E-value | Query Range |
Subject Range |
|
|
365.0 | [0..1] | [216..1] |
|
|
294.0 | [0..6] | [209..9] |
|
Region A: Residues: [1-115] |
1 11 21 31 41 51
| | | | | |
1 MGLCSSKKRM TTEITDEEVT AIRDVWRRAK TDNVGKKILQ TLIEKRPKFA EYFGIQSESL 60
61 DIRALNQSKE FHLQAHRIQN FLDTAVGSLG FCPISSVFDM AHRIGQIHFY RGVNF
|
| Detection Method: |  |
| Confidence: | 3.69897 |
| Match: | 1umoA |
| Description: | The crystal structure of cytoglobin: the fourth globin type discovered in amn |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [116-216] |
1 11 21 31 41 51
| | | | | |
1 GADNWLVFKK VTVDQVTTGT TDSSKEKEDT NSNGTANGKV DTDASLIPIA DINNVYSGEN 60
61 CLARLGWNKL MTVIVREMKR GFLEEAMRNC KEEDNNGLLS A
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.537 | b.1.6 | Cadherin |
| View | Download | 0.418 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.395 | a.118.1 | ARM repeat |
| View | Download | 0.392 | d.58.14 | Ribosomal protein S6 |
| View | Download | 0.380 | a.81.1 | N-terminal domain of DnaB helicase |
