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View Structure Prediction Details

Protein: CE00980
Organism: Caenorhabditis elegans
Length: 371 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE00980.

Description E-value Query
Range
Subject
Range
gi|32766568, gi|... - gi|40849878|gb|AAR95651.1| I-branching beta-1,6-acetylglucosaminyltransferase family polypeptide 3 [...
352.0 [0..11] [359..7]

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Predicted Domain #1
Region A:
Residues: [1-371]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANHDFCTKT MWALSVPLGV LLILFIALTA YATYSFHIFV PIAPNNEIDC AIMFNKSSED  60
   61 YLTYIENRTL LETTHNDRNC FQIRRRRYLP ADLPKSMSGF HNMFFIRVVS KDYDFVEEVL 120
  121 AMMHSPIHFF CFVLDINSEP LFKERMFRLG DCMVNVLVPR ELFNTSTAHG TLNAHRRCLR 180
  181 EIDEFDWKHA VITAEHDIPL HSTKFLSRRS RRLRDMVEMN GIHFKEETLA NANPNDTSSQ 240
  241 LFQVSRNWLQ HLCSVATISH SQHKVLYDYL LKTPDFDLPN DQHREISVVE QKCDTMKYDV 300
  301 DGSCLYAMED FSAIRNTTRL FIRADPHYDF GFVQCVHEVV FERTFFDPIS NKNANNYLYG 360
  361 SRVNLIDDYR N

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 87.0
Match: 2gakA
Description: No description for 2gakA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle