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View Structure Prediction Details

Protein: CE00920
Organism: Caenorhabditis elegans
Length: 279 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE00920.

Description E-value Query
Range
Subject
Range
gi|157775131 - gi|157775131|ref|XP_001665631.1| hypothetical protein CBG17979 [Caenorhabditis briggsae AF16]
gi|39591549, gi|... - gi|39591549|emb|CAE71125.1| Hypothetical protein CBG17979 [Caenorhabditis briggsae], gi|187025044|em...
306.0 [0..62] [262..70]

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Predicted Domain #1
Region A:
Residues: [1-279]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKPSTPAPA SADQNGDSAT RQTAQTTETP ASLLSAVGNG APNMAGFTLN RDMVPFFPYQ  60
   61 LQNPMLQPPQ NSLENAIVHS LGTLAAQSSM FGQLCEKMLK AQEEARADQR SIREEHRAER 120
  121 EKADERSQQN MDKMMALVHS LVERVDRSHA SSYDVVGQKN PSSSSLKPAK RVKSAVVRQS 180
  181 NLAKRTGAPV DAAKELKKIR DEENRNHGRS AERDNVFIGA VLVGKGSQYD KDLEKFKSFR 240
  241 CRTCNEVSQT KEQLVDHFSN NHAGELGARR SLRIKQTSC

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.19
Match: 2i13A
Description: No description for 2i13A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle