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View Structure Prediction Details

Protein: nuc-1
Organism: Caenorhabditis elegans
Length: 375 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nuc-1.

Description E-value Query
Range
Subject
Range
gi|109008733 - gi|109008733|ref|XP_001106353.1| PREDICTED: deoxyribonuclease II beta [Macaca mulatta]
423.0 [0..3] [374..10]

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Predicted Domain #1
Region A:
Residues: [1-234]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLSPAAVLI FLLLGVSQTY AAFSCKDQSG NDVDWFAVYK MPIEKDDGSV TGLAGGVAWY  60
   61 YVDVNKKGTL TPSAKTLDDN DQAIAYTLQQ YYDKQNDKTI FHVMYNDEPW GSKSTSGIKL 120
  121 EEILSNRVYS NYTHEDDSTS TAFGHTKGTI FFDGTSGVWL VHSVPLFPNP TKYEYPVSGH 180
  181 DYGQTMLCMT FKYAQLKSIG TQLFFNRPNI YSSNLPTNMA ADNADLAKAI AGQY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [235-375]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QKGQPFQSVI ELETMAGYSF TNFAKSKEFN ADLYDTLVAP TLKTDLVVET WRRGSEIPLD  60
   61 CKLTYHANDA LSIHVGSTTA FSYTKDHSKM AHSADMTKPW VCIGDINRMT SQYVRGGGTT 120
  121 CISSSFLWKA YSVIATQNNC A

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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