| Protein: | rps-0 |
| Organism: | Caenorhabditis elegans |
| Length: | 276 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rps-0.
| Description | E-value | Query Range |
Subject Range |
|
|
381.0 | [0..1] | [276..1] |
|
|
379.0 | [0..1] | [276..1] |
|
|
379.0 | [0..1] | [276..1] |
|
|
378.0 | [0..1] | [276..1] |
|
|
378.0 | [0..1] | [276..1] |
|
|
378.0 | [0..1] | [276..1] |
|
Region A: Residues: [1-203] |
1 11 21 31 41 51
| | | | | |
1 MSGGAAHSAL TEEDVMKLLA TQAHLGSTNL NFQMQQYVYK RRFDGPNIIN VKKTWEKLLL 60
61 AARAIAAVEN PADVVVVSAR PYAQRALLKF AAHTGATAIF GRFSPGCLTN QIQKTFKEPR 120
121 LLVISDPRID HQAVTEASYV GVPVISFVNT ESPLKLIDIG VPCNNKGERS IGLMWWMLAR 180
181 EILILRGKIS RQTGFVLEGK EIM
|
| Detection Method: |  |
| Confidence: | 59.69897 |
| Match: | 1s1hB |
| Description: | Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1H, Contains 40S subunit. The 60S Ribosomal Subunit Is In File 1S1I. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [204-276] |
1 11 21 31 41 51
| | | | | |
1 PDLYFYRDPT ETEKEETGAH ADVAEAQEYQ QPTDIDFTTQ GGKVDDWAAE TATWTAETKT 60
61 TEEWANAPTQ SNW
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
