| Protein: | CE00809 |
| Organism: | Caenorhabditis elegans |
| Length: | 399 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE00809.
| Description | E-value | Query Range |
Subject Range |
|
|
258.0 | [0..54] | [381..1] |
|
Region A: Residues: [1-399] |
1 11 21 31 41 51
| | | | | |
1 MVEVKIYLFF FFRFHFAVHF LFGDGRMSGQ SVPLIFLNCS SIFIFGKDEK YAECPIENGT 60
61 DPCYLLKEVH RAKEFRTYFL AILPIIFSVI ACLLNIGYLI AQLKCFTQEK TSFKKRQVFL 120
121 ISRSLSIILA NLLFYVVVIV WKANGFVYTS AMIFILIGGI NFLSVTGTYI GLTILLYTAI 180
181 AHQFWYMTKL TLTHCWLIIG LIWLLSAASS ICIGLWGATL FYPESAPISC SFEKCQQPLA 240
241 IIIVVGLSLC YGTVIGLYIA MMARLHRLVR KSSMIQARSN SNSMTAMKRL GLNMITFAIG 300
301 SIPILIVCIV ALANLRELSS LGEGSKGPCK TFLHSSLFVE VEILASVAAI VWLIAMIIDP 360
361 VINILADKKM RGLFAKQINR VSQRIRRAST KSTISTDDQ
|
| Detection Method: |  |
| Confidence: | 43.522879 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
