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View Structure Prediction Details

Protein: CE00515
Organism: Caenorhabditis elegans
Length: 419 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE00515.

Description E-value Query
Range
Subject
Range
CE07085 - status:Predicted UniProt:Q19599 protein_id:AAG24065.1
554.0 [0..1] [419..22]

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Predicted Domain #1
Region A:
Residues: [1-102]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGTQTCIQN SRWTVVNLKN AFQAEGPWEF VLGNNSRSYL NLKRTYLVYT FNITDQNGAI  60
   61 VNIPNPITKD SLVYAPINNI AHSIVKNFSL HINSQLAYHN SS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [103-215]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NYAYKAYFEN ALMYGKEIKN STLTAAGYFH EDEIGTPTSK GFLNRCGTGT TQVAANISLD  60
   61 LMNQPRVLLN SCNVKLTAYP NNSEFLIEAY NHGQQKFKFN VTDVYALVNE FDL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [216-255]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TDGLSNELEA AIIEHKMIQY PMISSQVRSF YIDGGRFDAP 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [256-344]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ANTLFTSKMP RRLFLGLVSS EAYNGSFGTT PFNFKPYGVT DVHIDYCGQT IPGRPMNLDF  60
   61 ENNKFVEAYV QLQETLGHTR NNFSCNSID

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [345-419]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IGMFRSKGYT IFGFELSPVA QDNNLFELVR QTNVSVRLNF KKETPPGGLY CVVYAEFDQI  60
   61 FSLDFMRNPI VDSIV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle