YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC3H5.11
Organism:	Schizosaccharomyces pombe
Length:	393 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC3H5.11.

Description	E-value	Query Range	Subject Range
gi\|39965347, gi\|... - gi\|39965347\|ref\|XP_365092.1\| hypothetical protein MGG_09937 [Magnaporthe grisea 70-15], gb\|EAA46716....	340.0	[0..50]	[391..202]
gi\|42545074, gi\|... - gi\|46108416\|ref\|XP_381266.1\| hypothetical protein FG01090.1 [Gibberella zeae PH-1], gi\|42545074\|gb\|E...	339.0	[0..50]	[391..291]
gi\|28926201, gi\|... - gi\|32420519\|ref\|XP_330703.1\| hypothetical protein [Neurospora crassa], gi\|28926201\|gb\|EAA35184.1\| hy... gi\|85112830 - gi\|85112830\|ref\|XP_964420.1\| hypothetical protein NCU03267 [Neurospora crassa OR74A]	336.0	[0..50]	[391..284]
gi\|114189636, gi... - gi\|115433294\|ref\|XP_001216784.1\| hypothetical protein ATEG_08163 [Aspergillus terreus NIH2624], gi\|1...	336.0	[0..50]	[391..31]
gi\|111061330 - gi\|111061330\|gb\|EAT82450.1\| hypothetical protein SNOG_10115 [Phaeosphaeria nodorum SN15]	334.0	[0..34]	[391..114]
gi\|83772001 - gi\|83772001\|dbj\|BAE62131.1\| unnamed protein product [Aspergillus oryzae] gi\|169777597 - gi\|169777597\|ref\|XP_001823264.1\| hypothetical protein [Aspergillus oryzae RIB40]	333.0	[0..50]	[391..283]
gi\|40742662, gi\|... - gi\|67901358\|ref\|XP_680935.1\| hypothetical protein AN7666.2 [Aspergillus nidulans FGSC A4], ref\|XP_41...	329.0	[0..50]	[391..231]
gi\|66846902, gi\|... - gi\|70988837\|ref\|XP_749271.1\| NAD+ kinase Utr1 [Aspergillus fumigatus Af293], gi\|66846902\|gb\|EAL87233... gi\|159128685 - gi\|159128685\|gb\|EDP53799.1\| NAD+ kinase Utr1, putative [Aspergillus fumigatus A1163]	329.0	[0..50]	[391..248]
gi\|62955137, gi\|... - gi\|62955137\|ref\|NP_001017580.1\| NAD kinase [Danio rerio], gi\|62205113\|gb\|AAH92723.1\| Zgc:110083 [Dan...	327.0	[0..69]	[391..96]
gi\|194540249, gi... - gi\|75857316\|ref\|ZP_00764932.1\| COG0061: Predicted sugar kinase [Vibrio sp. Ex25], gi\|254228625\|ref\|Z...	326.0	[0..73]	[391..1]

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Predicted Domain #1

Region A:
Residues: [1-393]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEFDDSCLP TNPTTENDYH GSFPYCSVHA QLYPYVSDCM VMHRKAPINE QEALRDVVWE  60
   61 TRTINKKLHV TPIKPNITSI LLVSKPGDEE VEEKLKEFVY WLISLDNITV FIQKSMEDLF 120
  121 EKTEKIQYWT TLLCTKHSQL FDLVLTLGGD GTVLYTSRLF QRTVPPIMPF AMGTLGFLTH 180
  181 FDVKKYKTSI LEICNEMYVH LRTRFECRVM KKKNRTQWIN IDEHLSQSLH ATDTETHTFT 240
  241 DSLVVLNEVV IDRGPNTAMS DIMLYVDSKY LTTVKADGLC ISTPTGSTAY SLAAGGSLCH 300
  301 PDISVMIVSP ICAHSLSLRP IHVPDSMALH VVIPQDAQQS SWISFDGRNR TELLPGDYLT 360
  361 VRISRYPFPT VHSTEEDADW FESIKRTLMW NQN

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	86.09691
Match:	2an1A
Description:	Structural Genomics, The crystal structure of a putative kinase from Salmonella typhimurim LT2
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits