YRC Public Data Repository - Protein Structure Prediction

Protein:	tom13
Organism:	Schizosaccharomyces pombe
Length:	71 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tom13.

Description	E-value	Query Range	Subject Range
gi\|190407317 - gi\|190407317\|gb\|EDV10584.1\| hypothetical protein SCRG_01375 [Saccharomyces cerevisiae RM11-1a] MIM1_YEAST - Mitochondrial import protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MIM1 PE=1... MIM1 - Mitochondrial outer membrane protein, required for assembly of the translocase of the outer membrane... gi\|151945604 - gi\|151945604\|gb\|EDN63845.1\| mitochondrial outer membrane protein [Saccharomyces cerevisiae YJM789]	99.0	[0..3]	[63..25]
gi\|42551515, gi\|... - gi\|46122971\|ref\|XP_386039.1\| hypothetical protein FG05863.1 [Gibberella zeae PH-1], gi\|42551515\|gb\|E...	90.0	[0..9]	[67..132]
MIM1_NEUCR, U322... - (Q8X0G8) Hypothetical UPF0322 protein B13O8.080, Mitochondrial import protein 1 OS=Neurospora crassa... MIM1_NEUCR - Mitochondrial import protein 1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / D...	89.0	[0..9]	[66..47]
gi\|145010890, gi... - gi\|39940714\|ref\|XP_359894.1\| hypothetical protein MGG_04883 [Magnaporthe grisea 70-15], gb\|EAA52191....	89.0	[0..9]	[66..47]
gi\|169776513 - gi\|169776513\|ref\|XP_001822723.1\| hypothetical protein [Aspergillus oryzae RIB40] gi\|220691653, gi... - gi\|238503219\|ref\|XP_002382843.1\| mitochondrial import protein, putative [Aspergillus flavus NRRL3357... gi\|83771458 - gi\|83771458\|dbj\|BAE61590.1\| unnamed protein product [Aspergillus oryzae]	81.0	[0..9]	[66..47]
gi\|159126094 - gi\|159126094\|gb\|EDP51210.1\| conserved hypothetical protein [Aspergillus fumigatus A1163] gi\|70984950, gi\|... - gi\|70984950\|ref\|XP_747981.1\| conserved hypothetical protein [Aspergillus fumigatus Af293], gi\|668456...	79.0	[0..9]	[66..48]
gi\|114189520, gi... - gi\|115433062\|ref\|XP_001216668.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	79.0	[0..9]	[66..43]
gi\|50304211, gi\|... - gi\|50304211\|ref\|XP_452055.1\| unnamed protein product [Kluyveromyces lactis], gi\|49641187\|emb\|CAH0244... gi\|49641187 - gi\|49641187\|emb\|CAH02448.1\| KLLA0B11814p [Kluyveromyces lactis]	79.0	[0..2]	[68..75]
MIM1_ASHGO, U322... - (P62512) Hypothetical UPF0322 protein AAR013W, Mitochondrial import protein 1 OS=Ashbya gossypii GN=... MIM1_ASHGO - Mitochondrial import protein 1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL...	77.0	[0..13]	[66..75]
gi\|88178794, gi\|... - gi\|88178794\|gb\|EAQ86262.1\| hypothetical protein CHGG_07515 [Chaetomium globosum CBS 148.51], gi\|1161...	77.0	[0..9]	[57..47]

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Predicted Domain #1

Region A:
Residues: [1-71]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKNTVTVPK TLFSQVIHIF KYAAINLGLP FLNGVMLGFG EIFAHAFIHS LGWAPGHTRI  60
   61 YSIQRHQYIQ A

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits