YRC Public Data Repository - Protein Structure Prediction

Protein:	SPBC577.03c
Organism:	Schizosaccharomyces pombe
Length:	216 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC577.03c.

Description	E-value	Query Range	Subject Range
gi\|114670346 - gi\|114670346\|ref\|XP_001136556.1\| PREDICTED: N-acetyltransferase 9 isoform 1 [Pan troglodytes]	126.0	[0..1]	[212..1]
NAT9_MOUSE - N-acetyltransferase 9 OS=Mus musculus GN=Nat9 PE=1 SV=2	123.0	[0..1]	[212..1]
gi\|189066547, gi... - gi\|52078087\|gb\|AAU25819.1\| embryo brain specific protein [Homo sapiens], gi\|189066547\|dbj\|BAG35797.1...	122.0	[0..1]	[212..1]
gi\|109492210, gi... - gi\|109492210\|ref\|XP_001081673.1\| PREDICTED: similar to NAT9 [Rattus norvegicus], gi\|109489363\|ref\|XP...	122.0	[0..1]	[212..184]
gi\|109118114, gi... - gi\|109118117\|ref\|XP_001090662.1\| PREDICTED: similar to N-acetyltransferase 9 isoform 2 [Macaca mulat...	119.0	[0..1]	[212..1]

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Predicted Domain #1

Region A:
Residues: [1-216]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKINQNTTVD CGNLILVPYQ KCHVLKYHNW MKNEELQELT CSEPLTLDEE YQMQASWSTD  60
   61 EDKLTFIVLL NENDEAKKPS ILDHVKAHSV ESMIGDVNMF LTEEYADGIE EFDDSPSDAN 120
  121 ATNATKESEV HIVGELELMI AEPQNRRKGY GTKIVDAFLH YVESSGIAKN KQILKYRVKV 180
  181 GSQNKPSIRL FKKLGFSQVK YNAYFDHVEL ELMRTS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	13.39794
Match:	2qmlA
Description:	No description for 2qmlA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits