YRC Public Data Repository - Protein Structure Prediction

Protein:	SPBP18G5.03
Organism:	Schizosaccharomyces pombe
Length:	430 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

No multiple sequence alignment data found for SPBP18G5.03.

Predicted Domain #1

Region A:
Residues: [1-204]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLQSPFGDG ISCECLNIRV LGIPNETKHQ WIFVPRDLIK IKIYSLLQIC KAENCSAVAC  60
   61 RGCNLCILAV QGNIEISEEP QKLFQEENVK VYIYDSAISL SSVRASFPIS ELGIRMDIIK 120
  121 ARAEPREDEI RASFSSLVNK EIKRTVEELL LSKRSTNRLS LLAFMRNQQL NYEAYETKLL 180
  181 EDASTIEKSL EKEVKTIYDS NIAS

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [205-430]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PKESSDAIDA DHAMIDESRS TQRRKSKPKK HVAFTDEYQV AFSDKPGKYF NQPMQYSKQF  60
   61 KLDNPDYEAS SDSLNDIENL STLTFRSDEE LEFDFDTNNI NNNKSGDSLE MSTTIPSDEE 120
  121 NEDFTSKVDA MEIHSGSLPL NIDSSPIFTN HSPSSSLSSE SSFEASPSSF VDRKNRWIQM 180
  181 LKKADEHSRS IQARSMGYVL SDDLDNSKAF RPYKQSFLAQ GWKSLN