YRC Public Data Repository - Protein Structure Prediction

Protein:	SPCC1020.05
Organism:	Schizosaccharomyces pombe
Length:	509 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC1020.05.

Description	E-value	Query Range	Subject Range
gi\|38109549, gi\|... - gi\|39957880\|ref\|XP_364364.1\| hypothetical protein MG09209.4 [Magnaporthe grisea 70-15], gb\|EAA55402....	389.0	[0..6]	[508..112]
gi\|46109928, gi\|... - gi\|46109928\|ref\|XP_382022.1\| hypothetical protein FG01846.1 [Gibberella zeae PH-1], gi\|42544510\|gb\|E...	381.0	[0..6]	[508..3]
gi\|67526293, gi\|... - gi\|67526293\|ref\|XP_661208.1\| hypothetical protein AN3604.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	364.0	[0..2]	[508..250]
gi\|32405676, gi\|... - gi\|32405676\|ref\|XP_323451.1\| hypothetical protein [Neurospora crassa], gi\|28922810\|gb\|EAA32031.1\| hy... gi\|85102108 - gi\|85102108\|ref\|XP_961267.1\| hypothetical protein NCU04111 [Neurospora crassa OR74A]	363.0	[0..6]	[508..3]
gi\|88178610, gi\|... - gi\|88178610\|gb\|EAQ86078.1\| hypothetical protein CHGG_07331 [Chaetomium globosum CBS 148.51], gi\|1161...	356.0	[0..6]	[508..3]
gi\|169764619 - gi\|169764619\|ref\|XP_001816781.1\| hypothetical protein [Aspergillus oryzae RIB40] gi\|220690763, gi... - gi\|238504120\|ref\|XP_002383292.1\| phosphoesterase, putative [Aspergillus flavus NRRL3357], gi\|2206907... gi\|83764635 - gi\|83764635\|dbj\|BAE54779.1\| unnamed protein product [Aspergillus oryzae]	335.0	[0..6]	[508..3]
gi\|115389656, gi... - gi\|115389656\|ref\|XP_001212333.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	329.0	[0..2]	[508..233]
gi\|66849194, gi\|... - gi\|70993426\|ref\|XP_751560.1\| phosphoesterase [Aspergillus fumigatus Af293], gi\|66849194\|gb\|EAL89522.... gi\|159125510 - gi\|159125510\|gb\|EDP50627.1\| phosphoesterase, putative [Aspergillus fumigatus A1163]	300.0	[0..6]	[508..3]
gi\|111070770 - gi\|111070770\|gb\|EAT91890.1\| hypothetical protein SNOG_00395 [Phaeosphaeria nodorum SN15]	259.0	[0..49]	[508..203]
gi\|68469914, gi\|... - gi\|68469914\|ref\|XP_720967.1\| hypothetical protein CaO19.843 [Candida albicans SC5314], gi\|68469675\|r... orf19.843, orf19... - orf19.843 CGDID:CAL0002750 Assembly 19, Contig19-10076 (106895, 109081) CDS, translated using codon ...	221.0	[0..99]	[508..297]

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Predicted Domain #1

Region A:
Residues: [1-166]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMLPKRNIIH FLRKRAIFIV AAFIALLTVD YSLNTIEITD SKSGPFSLNT PIEDIRLVEC  60
   61 FSFSPFCRPV LEFWKWARTS RNLYRSRIPW KRAYLYVKRP ALYIPGETVL VEQVYVDRQL 120
  121 EKRNKHGIQI RYGTDGDICE FNTLLGEDVV ELREGWSAVL NDFIYL

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [167-509]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GQPVLLTQRP CETPPTPSIE ALKRKELSSV TLTYDDEEKK TIKILQLSDL HYSNSDRPCR  60
   61 DPYPYETAED CMADAKTTAF VNELLQLEEP DFVLLTGDLI NGDTSRDARS SLMKAVSPFV 120
  121 DYNVPFAVNF GNHDDLGDLS REELAKILSQ IPGSMGLIGN VSGVGNFVLH SPRKFAIYVL 180
  181 DTKGDTSNRR LCPGYDAITE DQLEWLSSKV ADFKYEPIQM AVLHIPLKEF CETEDLVGAF 240
  241 REPCSYSICD PNTAKALKSL RIPLAIAGHD HVNDFCGIHP DYNTYFCFAG GAGFGGYGGH 300
  301 GGYVRRARVF ELDPVERAVR TWKRLEWPPE DRKLMLDVQT ILV

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	31.221849
Match:	1xzwA
Description:	Sweet potato purple acid phosphatase/phosphate complex
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits