YRC Public Data Repository - Protein Structure Prediction

Protein:	SPBC19C7.04c
Organism:	Schizosaccharomyces pombe
Length:	124 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC19C7.04c.

Description	E-value	Query Range	Subject Range
gi\|151943545 - gi\|151943545\|gb\|EDN61856.1\| conserved protein [Saccharomyces cerevisiae YJM789] IBI1 - Putative protein of unknown function; expression downregulated by treatment with 8-methoxypsoralen p... YG5Q_YEAST - Uncharacterized protein YGR273C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YGR273C ... gi\|207344890 - gi\|207344890\|gb\|EDZ71880.1\| YGR273Cp-like protein [Saccharomyces cerevisiae AWRI1631]	161.0	[0..1]	[124..21]
gi\|45185374, gi\|... - gi\|45185374\|ref\|NP_983091.1\| ABR144Cp [Ashbya gossypii ATCC 10895], gi\|44981063\|gb\|AAS50915.1\| ABR14... gi\|44981063 - gi\|44981063\|gb\|AAS50915.1\| ABR144Cp [Ashbya gossypii ATCC 10895]	131.0	[0..5]	[90..88]
gi\|49529250 - gi\|49529250\|emb\|CAG62916.1\| unnamed protein product [Candida glabrata] gi\|50295050, gi\|... - gi\|50295050\|ref\|XP_449936.1\| hypothetical protein CAGL0M13629g [Candida glabrata CBS138], gi\|4952925...	125.0	[0..1]	[92..34]
gi\|28919667, gi\|... - gi\|32422113\|ref\|XP_331500.1\| predicted protein [Neurospora crassa], gi\|28919667\|gb\|EAA29081.1\| predi... gi\|85090228 - gi\|85090228\|ref\|XP_958317.1\| hypothetical protein [Neurospora crassa OR74A]	120.0	[0..5]	[83..84]
gi\|38099350, gi\|... - gi\|39965253\|ref\|XP_365083.1\| hypothetical protein MG09928.4 [Magnaporthe grisea 70-15], gb\|EAA46707....	120.0	[0..5]	[98..139]
gi\|49640565, gi\|... - gi\|50302993\|ref\|XP_451434.1\| unnamed protein product [Kluyveromyces lactis], gi\|49640565\|emb\|CAH0302... gi\|49640565 - gi\|49640565\|emb\|CAH03022.1\| KLLA0A09933p [Kluyveromyces lactis]	120.0	[0..1]	[89..35]
orf19.2887 - MET13 CGDID:CAL0005225 Assembly 19, Contig19-10162 (51431, 50817) CDS, reverse complemented, transla... gi\|46437169, gi\|... - gi\|68481003\|ref\|XP_715543.1\| hypothetical protein CaO19.2887 [Candida albicans SC5314], gi\|46437169\|...	118.0	[0..1]	[87..34]
gi\|46108790, gi\|... - gi\|46108790\|ref\|XP_381453.1\| hypothetical protein FG01277.1 [Gibberella zeae PH-1], gi\|42547743\|gb\|E...	116.0	[0..5]	[98..81]

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Predicted Domain #1

Region A:
Residues: [1-124]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEVTKINPS TAITELEPYE MAQTNKEVPT TSLLSKDYYG HSIEEPDENN PTRWRYERPL  60
   61 DTVRAWQYLI DCDENFKTKP HREQNQYRPT ADSFRPLSFA SMESKLTQRL SRHLSKTSSR 120
  121 HSRL

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

		MCM Score	SCOP Match	SCOP Description
View	Download	0.306	c.23.1	CheY-like
View	Download	0.298	c.23.1	CheY-like
View	Download	0.278	c.23.1	CheY-like
View	Download	0.275	c.23.1	CheY-like
View	Download	0.273	a.24.9	alpha-catenin/vinculin
View	Download	0.272	a.4.1	Homeodomain-like
View	Download	0.206	a.133.1	Phospholipase A2, PLA2

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits