| Protein: | SPAC227.11c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 322 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC227.11c.
| Description | E-value | Query Range |
Subject Range |
|
|
301.0 | [0..11] | [304..20] |
|
|
300.0 | [0..11] | [304..4] |
|
|
300.0 | [0..11] | [304..4] |
|
|
300.0 | [0..11] | [304..4] |
|
|
299.0 | [0..11] | [304..4] |
|
Region A: Residues: [1-86] |
1 11 21 31 41 51
| | | | | |
1 MFPHLILPAI GSSKVRTMVL PFAFVGFFIF PICLASLLDW NDAYEYPKYS FEWSNVSILE 60
61 GDIDSIKEKT EKTKLSSLFY AGKHEY
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [87-322] |
1 11 21 31 41 51
| | | | | |
1 FCVYPNASLI KQNSTTEPSY DLQELRIQGT EKINELANVF LIENRGYWTY DYVYGQHVRQ 60
61 YHLEPQQGSD KVLANPMYIL GTAPNTQTKK NLEENWAIGF VEGKAYLQTT FRNGTMCDIT 120
121 KRPRHVILSY ECSTNSDTPE ITQYQEVSSC AYSMTIHVPG LCSLPAFKIQ EDIPSEKIVC 180
181 YNVIKEKSNE VDHKDSQHVV DEVAQTSPPE VKEVETQSMM IFDDTNTLGF YPCSSV
|
| Detection Method: | |
| Confidence: | 4.69897 |
| Match: | 1c39A |
| Description: | Cation-dependent mannose 6-phosphate receptor, extracytoplasmic domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.18977958086902 | bayes_pls_golite062009 |
| catalytic activity | 0.267260440343973 | bayes_pls_golite062009 |
| protein binding | 0.237956608291517 | bayes_pls_golite062009 |
