YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC1A6.05c
Organism:	Schizosaccharomyces pombe
Length:	483 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC1A6.05c.

Description	E-value	Query Range	Subject Range
gi\|46126355, gi\|... - gi\|46126355\|ref\|XP_387731.1\| hypothetical protein FG07555.1 [Gibberella zeae PH-1], gi\|42553609\|gb\|E...	440.0	[0..3]	[478..76]
gi\|67522513, gi\|... - gi\|67522513\|ref\|XP_659317.1\| hypothetical protein AN1713.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	435.0	[0..3]	[478..87]
orf19.5426, orf1... - orf19.5426 CGDID:CAL0005212 Assembly 19, Contig19-10227 (94197, 97046) CDS, translated using codon t... gi\|46439429, gi\|... - gi\|68476486\|ref\|XP_717704.1\| potential patatin-like phospholipase [Candida albicans SC5314], gi\|6847...	434.0	[0..4]	[478..72]
gi\|85091127 - gi\|85091127\|ref\|XP_958750.1\| hypothetical protein NCU09407 [Neurospora crassa OR74A] gi\|28920133, gi\|... - gi\|32423323\|ref\|XP_332099.1\| hypothetical protein [Neurospora crassa], gi\|28920133\|gb\|EAA29514.1\| co...	431.0	[0..6]	[478..90]
gi\|44982921 - gi\|44982921\|gb\|AAS52151.1\| ADR231Cp [Ashbya gossypii ATCC 10895] gi\|45188104, gi\|... - gi\|45188104\|ref\|NP_984327.1\| ADR231Cp [Ashbya gossypii ATCC 10895], gi\|44982921\|gb\|AAS52151.1\| ADR23...	427.0	[0..4]	[478..84]
gi\|207343323 - gi\|207343323\|gb\|EDZ70811.1\| YKR089Cp-like protein [Saccharomyces cerevisiae AWRI1631] gi\|190409901 - gi\|190409901\|gb\|EDV13166.1\| hypothetical protein SCRG_04104 [Saccharomyces cerevisiae RM11-1a] TGL4 - Multifunctional triacylglycerol lipase, steryl ester hydrolase, and Ca2+-independent phospholipase A... TGL4_YEAST - Lipase 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TGL4 PE=1 SV=1	425.0	[0..4]	[483..146]
gi\|170940016, gi... - gi\|27764284\|emb\|CAD60564.1\| unnamed protein product [Podospora anserina], gi\|170940016\|emb\|CAP65242.... gi\|171680777 - gi\|171680777\|ref\|XP_001905333.1\| unnamed protein product [Podospora anserina]	420.0	[0..6]	[478..87]
gi\|169773523 - gi\|169773523\|ref\|XP_001821230.1\| hypothetical protein [Aspergillus oryzae RIB40] gi\|83769091 - gi\|83769091\|dbj\|BAE59228.1\| unnamed protein product [Aspergillus oryzae]	412.0	[0..10]	[478..1]
gi\|70994310, gi\|... - gi\|70994310\|ref\|XP_751982.1\| Patatin family phospholipase [Aspergillus fumigatus Af293], gi\|66849616...	411.0	[0..3]	[482..83]

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Predicted Domain #1

Region A:
Residues: [1-91]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKNEIKLQM EYASSYETWL EAAEKLDVIE GKYQWREQKE SDEYDYVLVE SRLHELRRHR  60
   61 LSKNTRLLLG LLRNSVARDF ANMDNSRLYN Y

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [92-145]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AHSGTKKLID EFIQEVLMCL TYLEETPDLS LDEKITEFSR LKLTTGNTAL ILSG

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	3.69897
Match:	1cjyA
Description:	Domain from cytosolic phospholipase A2; Cytosolic phospholipase A2 catalytic domain
Matching Structure (courtesy of the PDB):

Predicted Domain #3

Region A:
Residues: [146-365]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GGTFGMTHIG VLQSLHEQGL VPKIICGSSA GAIVACAAAV RNKEEQEILL RQFHTGDLSV  60
   61 FTDPNAAPPS VIQSVKQYFT RGCVLDISHL ERVMKLLIGD FTFQEAYDRS GYILNVTVSC 120
  121 GSLFEMPSLL NYITAPNVLV WSAVVATCSV PFLFKRATLW ERDPLTREVS AFCVTDAPLW 180
  181 MDGSVDNDIP HAKLTELFHV NHFIVSQVNF HIVPFIMDPT

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	16.39794
Match:	1oxwA
Description:	Patatin
Matching Structure (courtesy of the PDB):

Predicted Domain #4

Region A:
Residues: [366-483]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SHNWVERCCK KAIDLAAQEV SLTFRLFAEL GIFSVLFTKL QSVITQKYSG DITIIPRLNY  60
   61 REVNKVIKNP TPSFLLDAAT RGKRGTWTKV PVTRNHCAIE ILIAAAYTRL IKRSKSLK

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.618	0.953	GTP binding	c.37.1	P-loop containing nucleoside triphosphate hydrolases

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits